Welcome to the Introduction to Python Course#
Image Segmentation with Deep Learning
- A Gentle Introduction to Deep Learning for Microscopy
- Quiz Time
- A Brief Timeline of Deep Learning
- Quiz Time
- Introduction to Cellpose
- Cellpose-SAM: superhuman generalization for cellular segmentation
- Run Cellpose-SAM in 3D
- Cellpose-SAM: superhuman generalization for cellular segmentation
- Train new model
- Evaluate on test data (optional)
- Quality control of segmentation results
- Feature extraction (intensity, morphological and spatial features)
- Building bioimage analysis workflows (ZeroCostDL, Bioimage Zoo)